Showing posts with label Biochemistry. Show all posts
Showing posts with label Biochemistry. Show all posts

Sunday, 19 February 2017

RNA

Credits: Dr. Rebecca James, Biochemistry
####Facts RNA Editing####
● It is an exception to Central Dogma of Molecular Biology.
i.e., DNA ---- RNA ------ Protein.
● Apo B gene codes for Apo B Protein.
● In Intestine the gene codes apo B48, whereas the same gene to apo B 100 in liver.
● In liver ..... apoB gene .. apo B 100 Protein.
● In Intestine
Apo B gene to Apo B RNA.
● In 48th codon of apo B mRNA there is CAA.
● This C in CAA undergo editing, i.e., mRNA editing
i.e., Deamination of C to U.
● Now at 48th position CAA is changed to UAA.
● UAA is a stop codon.
● So instead of apo B100, here the same gene produces apo B48.
● This is an example of RNA editing.

Thursday, 23 June 2016

Mucopolysaccharidosis

Farbers- mimicks rheumatoid arthritis

Fabry's- angiokeratomas, debilitating pain, Maltese crosses, Fabry Crises/cries

Gm1 gangliosidosis- Angiokeratomas, HSM, typical facial features like frontal bossing, long philtrum, wide set ears,cherry red spot, blind n deaf by 1yr and death by 3-4 yrs

Taysach's disease- macular pallor, cherry red spot, Macrocephaly, seizures, death by 4-5 yrs

Sandhoff- similar to taysachs except with having HSM, cardiac and bone involvement in sandhoff.

Gaucher's- pancytopenia, bleeding, Bone crises (severe swelling n pain), No cherry red spot n No MR.pathological hallmark is Gaucher cell in BM, Xray femur shows erlen meyer flask deformity..

Zinc

🏈   ZINC  🏉
("Hamari Desh ki Shaan")

⚽ MetalloEnzymes :
CARBOXYPEPTIDASE
CARBONIC ANHYDRASE
ALCOHOL DEHYDROGENASE

⚽MICROMINERAL, RDA in children of Age
  <6 months: 5 mg/day
>6 months : 10mg/day

⚽Chiefly distributed in skeletal muscles 💪 and
bones🍖 ( Highest concentration: Hippocampus & Prostate)

⚽Zinc deficiency :
Mild - stunted growth,  hypoguesia, impaired immunity
Severe - dwarfism, hypogonadism, hypopigmented Hair

⚽ Diagnosis of Zn deficiency -
Levels <12M (<70g/dL)

⚽Early indicator of Zn deficiency -
Reduced THYMULIN levels

⚽Zinc containing protein in Saliva:
GUSTEN

⚽PEDIATRIC DOSE OF ZINC IN ACUTE DIARRHEA [for 2 weeks]:

⚾2-6 months: 10 mg / day
⚾>6  months: 20 mg / day

Wednesday, 30 December 2015

Lipids

High TG --chylomicrons
High cholesterol --LDL
HIGH PHOSPOLIPDS-HDL
LOW PHOSPHOLIPIDS-chylomicrons
High lipid contains-chylomicrons
Low lipid contains-HDL
Low cholesterol -chylomicrons
Low TG -HDL
Lowest density-chylomicrons
Max density-HDL
Large size-chylomicrons
Small size-HDL
Max protein-HDL
Low protein-chylomicrons
Max electrophoresis mobility-HDL
Least mobility-- chylomicrons

Tuesday, 10 November 2015

Odours from Metabolic diseases

Odor originating from Metabolic Disorder

a. Trimethylaminuria

Trimethylaminuria also called fish odor syndrome or TMAU is a genetic disease. It is due to abnormal excretion of trimethylamine in the breath, urine, sweat, saliva and vaginal secretions. The odor produced is similar to decaying fish. The smell consists of sulfur compounds, plus nitrogen compounds (amines). The trimethylamine is made by bowel bacteria that break down certain amino acids, carnitine and choline that are in high concentrations in marine fish, egg yolks, certain beans and liver.

b. Maple Syrup Urine Disease

Maple syrup urine disease or MSUD refers to a rare inherited metabolic condition. The first form results from a deficient enzyme (branched-chain alpha-keto acid dehydrogenase, BCKD) necessary for the breakdown of the amino acids leucine, isoleucine, and valine. Without this enzyme, these amino acids build up to toxic levels in the body. If left untreated, this leads to brain damage and progressive nervous system degeneration in infants. Babies that suffer from the mild form have a sugary smell. Adults may have a burned sugar smell to urine. There second form responds well to the vitamin thiamine. It is reported that the patients smell like caramel, maple syrup or have a malty odor.

c. Phenylketunuria

Phenylketunuria or PKU is another inherited metabolic disorder. In this case the body cannot completely break down the protein phenylalanine because it lacks the enzyme phenylalanine hydroxylase. Because of this, phenylalanine builds up in the body’s cells and causes nervous system and brain damage. High levels of phenylalanine leads to increased levels of phenylketones in the blood which are excreted in the urine. The person may present a musty, mousy, wolflike, barny, horsey or stale smell.

d. Multiple Acyl-CoA Dehydrogenase Deficiency

Multiple acyl-CoA dehydrogenase deficiency (MADD) is an inherited fatty acid oxidation disorder (FOD). A person with MADD cannot efficiently breakdown fats and protein into energy. Once the body uses up its first source of energy, blood sugar (glucose), the body becomes weaker because it cannot then make energy from fats. Therefore, people with this disorder must eat on a very regular basis and should not go long without food. The person presents variable body odor of sweaty feet.

e. Isovaleric Acidaemia

Isovaleric acidaemia is a rare genetic condition in which the body is unable to process certain proteins properly. People with this disorder have abnormal levels of an enzyme that helps break down the amino acid leucine, a building block of proteins. It is related to the genetic metabolic disorder Maple syrup syndrome. A symptom of isovaleric acidemia is a odor of cheesy, acrid,sweaty feet. This odor is result of the buildup of isovaleric acid compound.

f. Tyrosinaemia

Tyrosinaemia is an error of metabolism, inherited, in which the body can not effectively break down the amino acid tyrosine, found in most animal and plant proteins. It is an autosomal recessive, that means two copies of an abnormal gene must be present in order for this to develop. There are three types of tyrosinemia, each with distinctive symptoms and caused by the deficiency of a different enzyme. One of the symptoms of Tyrodinaemia type 1 is a odor like cabbage or rancid butter.

g. Diabetes Mellitus

Diabetes Mellitus. Almost all of the food we eat is broken down into glucose (sugar in the blood). Glucose is the main source of fuel for the body and is used by cells for growth and energy. Glucose needs insulin to get into cells. Insulin is a hormone made by the pancreas. In individuals with diabetes, the pancreas may create little or no insulin, or the cells do not react appropriately to the insulin that is produced. Glucose builds up in the blood, and is excreted in the urine. So the body loses its primary source of fuel. Fruity breath is present in people with diabetes.

h. Diabetic Ketoacidosis

Diabetic ketoacidosis. When the level of the blood sugar gets too high, the body creates "ketones" as a by-product of fat digestion. These ketones create blood acidity which causes "acidosis" of the blood. At the same time, the kidneys excrete large amounts of glucose-rich urine, causing dehydration. The patient may have a fruity breath, a sweet taste on the skin, or emanate a distinctive, chemical smell.

i. 3-Methylcrotonylglycinuria

3-Methylcrotonylglycinuria, multiple carboxylase deficiency or 3MCC is another autosomal recessive genetic trait means that this faulty gene usually appears when two carriers have children together and pass it to their offspring. In this case the body is unable to process certain proteins properly. Patients have abnormal levels of an enzyme that helps break down proteins containing the building block (amino acid) called leucine. As a carboxylase enzyme, 3-MCC requires biotin for activity. There are four carboxylases in humans that use biotin and each can be deficient singly or together. If biotin metabolism is defective, functions of all four carboxylases will be low, resulting in Multiple Carboxylase Deficiency. MCC is predominantly located in the inner membrane of the mitochondria. The patient presents an odor like male cat urine.

j. Cystinuria

Cystinuria is an inherited, metabolic disorder. It is characterized by the accumulation of cystine crystals (uroliths, caculi or stones) in the kidneys, ureter and bladder. People with cystinuria cannot properly reabsorb cystine into their bloodstream during the filtering process in the kidneys. Cystine is a amino acid, a building block of proteins. Most of the time, this excess cystine is simply excreted in the urine. But in some cases the cystine cannot stay dissolved and forms crystals. Because cystine is one of the sulfur-containing amino acids, the urine may have a characteristic "rotten egg" odor.

k. Hypermethioninemia

Hypermethioninemia this condition can happen when methionine (amino acid) is not metabolized correctly in the body. Individuals with this condition may experience a fishy, sweety and fruity, rancid butter or boiled cabbage odor. It has been said that tyrosinosis-tyrosinemia is the same as hypermethioninemia.

l. Oast-House Syndrome

Oast-house syndrome also called Smith-Strang diesease is an inherited disease (autosomal recessive) due to malabsorption of methionine and secondary malabsorption of other amino acids. Part of the unabsorbed methionine is converted by colonic bacteria to a-hydroxybutyric acid. The urine has an odor similar to that of dried celery, yeast or malt, or an oasthouse (a building for drying hops). The patients have white hair, mental retardation among other symptoms.

m. Congenital Adrenal Hyperplasia

Congenital adrenal hyperplasia – CAH is a group of inherited disorders which causes an enzyme deficiency (most commonly 21-hydroxylase) resulting in the inability of the adrenal glands to make hormones: cortisol and/or aldosterone. Since the body can't make enough cortisol (and in some cases aldosterone), it stimulates the production of other adrenal hormones that are called androgens. Three main forms of Congenital Adrenal Hyperplasia (CAH) exist: the severe salt-wasting, non-salt wasting forms, and a milder form. The non classical or milder form of CAH can produce body odor during childhood because of the premature puberty.

Friday, 16 October 2015

VITAMIN DEFICIENCIES In Different Conditions

VITAMIN DEFICIENCIES In Different
Conditions::::

1■■Alcoholics===Folate and thiamine.
2■■Smoking===Vitamin C due to used up
by FR in smoke.
3■■New born===Vitamin K due to sterile
gut
Bcz MC source of Vitamin K is gut
bacteria.
4■■Hospitalized Pts===Vitamin
K>>>Biotin
Bcz of antibiotics use that kills gut
bacteria
5■■Renal Failure ===Vitamin D.
Due to failure of 1 alpha hydroxylation.
6■■Rice as staple diet===B1 Deficiency
That's why it has been enriched with B1
in some countries
7■■Perniciuos anemia===Autoimmune
atrophic gastritis===B--12 deficiency.
8■■Colostrum (Breast milk upto 4
days)=== deficient in Vitamin D.
9■■Breast milk=== deficient in D ,K, fluoride and
pantothenic acid (Cpsp key).
10■■Goat milk === deficient in Vitamin
B6 ,Folate .
11■■Cow milk === deficient in Vitamin A
,C ,D.
12■■Post menopauseal wome===
deficient in vitamin D (400 IU daily intake
recommended ).
13■■Women strict vegetarian ===B12
DEFICIENCY in her and her baby if
pregnant or non.
14■■Pregnant lady === Folate deficiency
bcz of its more excretion due to increased
GFR
And Fetal tissue growth consumption.
15■■Pregnant lady with alcohol
consumption ===MC Vitamin Deficiency
===Folate.
Increased NTDs risk.
16■■People having just maize their Staple
diet===B3 NIACIN deficiency ===risk of
PELLAGRA 3D diarrhea dementia
dermatitis.
17■■Celiac disease involves ===Jejunum
mostly===So Folate deficiency.
18■■Crohns disease ===Involves ILEUM
===so B12 deficiency occur.
19■■Terminal ileal resection ===B12
&Bile salts deficiency === osmotic
diarrhea and increased water loss and bile
salts (Ganong).
20■■Cystic Fibrosis ===ADEK fat soluble
vitamins deficiency
21■■Total pancreatectomy === ADEK
DEFICIENCY.
22■■Alcoholics==MC deficiency of Mg.

Monday, 21 September 2015

Vitamin D levels

Based on serum levels of Vitamin D, classified into;
Deficient: less than 10ng/ml
Insufficient: 10-20
Optimal: 20-60
High: 60-90
Toxic: greater than 90
(Ref:O.P Ghai 8th edition page 114)

Vitamins

Stable and light sensitive Vitamin K and !
Vitamin required for electron Transport
(Coenz. Q) K1, B2
Dopa and Gaba : Metabolism depend on Pyridoxine
For the Function of Co.A Pantothenate
Folic acid is Pteroyl Glutamic acid
Folinic Acid is Citrovorum factor
Erythrocyte Maturation Factor B 12
Vitamins Stored in Liver A, D, K, B 12, Folate
Vitamin Stored in fat D
Richest Source of 
Vitamin A Codliver Oil
Vitamin E Halibut Liver oil
Prophylactic Dose of Vitamin A 66,000 Micrograms
Main Source of Thiamine in Indian Diet Cereals
P.E. T and Achalasia are expected to be due to deficiency of Thiamine
Yellow Crystalline Substance Riboflavine
Red Crystalline Substance B 12
White Crystalline Substance Ascorbic Acid
Vitamins Which are present in animal Foods only B12, D

Heat Labile Vitamins Vitamin C and Folic acid
Vitamins That are synthesised in Gut
(Flora) B2, B12 ( Not useful) and Vitamin K
In body (Skin) Vitamin D
F.I.G.L.U excretion is secreted in deficiency of B 12
Methylmalonic acid Excretion is increased in deficiency of B 12
Worm infestation causing B 12 deficiency Diphyllobothrium Latum
Vitamin which is an antoxidant Vitamin E
Vitamin useful in the treatment of methemoglobinemia Vitamin C ( Methylene Blue also useful)
Vitamins with which Hypervitaminosis occurs A and D
Vitamin deficiency which leads to convulsions Pyridoxine
Vitamin useful in treatment of Homocystinuria Pyridoxine
Vitamin useful in treatment of Alcaptonuria Vitamin C
Vitamin that is used peripheral vascular disease Vitamin E. ( For intermittent Claudication)
Vitamins that causes Hemolysis Vitamin K
Vitamin that causes Neonatal Jaundice Vitamin K
Vitamin that causes sensory polyneuropathy in megavitamin doses Pyridoxine
Vitamin deficiency that causes pseudo paralysis Vitamin C, Vitamin D
Vitamin for wound healing Vitamin C
Magenta red tongue is due to deficiency of Riboflavine
Raw beef tongue is due to deficiency of Niacin
Cataract formation and Corneal
vascularisation are due to deficiency of Riboflavine
Vitamin that does not cross placenta Vitamin D
Vitamin Destroyed by Ultra – Violet Light

Sunday, 20 September 2015

Tyrosine Metabolic Disorders

Tyrosine Metab Disorders :-
Tyrosinemia type-1
Enzyme Defect - Fumaryl AcetoAcetate
hydrolase
Inheritence AR
Tyrosinemia type-2
Enzyme Defect - Tyrosine Transaminase
Inheritence - AR
Tyrosinemia type-3
Enzyme Defect - 4 Hydroxyphenylpyruvate
dioxygenase
Inheritence - AR
Hawkinsinuria - 4 HydroxyPhenylPyruvate
dioxygenase
Inheritence - AD
Alkaptonuria
Enzyme Defect- Homogentisic Acid oxidase
Inheritence - AR
Albinism
Enzyme Defect - Tyrosinase
Inheritence - AR
Disorders of PhenylAlanine Metab :-
PKU Type 1
Enzyme Def :- PhenylAlanine Hydroxylase
Inheritence AR
PKU Type 2
Enzyme Def :- Dihydropteridine reductase
Inheritence :- AR

Saturday, 12 September 2015

Bioenergetics

Calculation For Energy (Atp ) Generated By Fatty Acid Oxidation , Tca Cycle , Glycolysis & Pdh System

I) Basic Rules-

A) Energetics Of Glycolysis-

1. Energy Production Steps-

     2nadh2= 2× 2.5 Atp (New) &  2× 3 Atp (Old)= 5 Atp (New) &  6 Atp (Old) - For Aerobic Glycolysis

     Substrate Level Phosphorylation = 2× 2atp = 4 Atp

     Total= 9 Atp (New) &  10 Atp (Old)-aerobic Glycolysis

                   = 4 Atp - Anerobic Glycolysis

2. Energy Utilizing Steps-
    
     2× 1atp = 2atp

3. Net Atp Produced-

     For Aerobic Glycolysis-   9 Atp (New) &  10 Atp (Old) - 2atp= 7 Atp (New) &  8 Atp (Old)

     For Anerobic Glycolysis - 4 Atp - 2atp = 2atp

B) Energetics Of Pyruvate Dehydrogenase Complex-
     
      Energy From Conversion Of 2 Moles Of Pyruvate To Acetyl Coa (Aerobic Respiration) = 2× 1nadh2= 2nadh2

      Net Energy Yield= 2nadh2 = 2× 2.5 Atp (New) & 2 × 3 Atp (Old) = 5 Atp (New) & 6 Atp (Old)

C. Energetics Of Tca Cycle-each Cycle With 1acetyl Coa Metabolism Produces-

        3nadh2 =  3 × 2.5  Atp (New) & 3×3 Atp (Old) = 7.5  Atp (New) & 9 Atp (Old)

        1fadh2 =   1× 1.5  Atp (New) & 1×2 Atp (Old)  = 1.5 Atp (New) &  2 Atp (Old)

         Substrate Level Phosphorylation- 1 Gtp Formed Which Is Converted To Atp Via Adp
          Gtp + Adp = Atp + Gdp
        Thus 1atp
 
Net Yield Of Atp Per Turn ( 1mol Of Acetyl Coa) =  10 Atp (New) &  12 Atp (Old)

Thus Total Atp In Tca Cycle  Per  Molecule Of Glucose = 2 Acetyl Coa =2× 10/12= 20 Atp (New) &  24 Atp (Old)

D) Thus Net Yield Of Atp When 1molecule Of Glucose Is Completely Oxidised  Aerobically-

   1. From Aerobic Glycolysis= 7 Atp (New) &  8 Atp (Old)

   2. From Pdh Complex= 5 Atp (New) & 6 Atp (Old)

   3. From Tca Cycle= 20 Atp (New) &  24 Atp (Old)

  Net Atp Produced= 32 Atp (New) &  38 Atp (Old)

E) Energetics Of Fatty Acid Oxidation-

1. Initial Activation Req 2 Atp= (-2atp)

2. Each Cycle Removes 1acetyl Coa & Produces-

                 1fadh2=1.5 Atp (New)  & 2 Atp (Old)

                 1 Nadh2= 2.5 Atp (New) & 3 Atp (Old)

                   Total = 4  Atp (New) & 5 Atp (Old)

3. Thus Each Cycle Produces 4 Atp (New) & 5 Atp (Old) & 1 Acetyl Coa

4. Each Mole Of Acetyl Coa Produces 10 Atp (New) &  12 Atp (Old) In Tca Cycle

5. Now Taking  Example Of Say Palmitic Acid- (C16) Saturated Fatty Acid

     It Undergoes  7 Cycles Of Beta Oxidation To Produce 8 Moles Of Acetyl Coa

     Thus Atp From 7 Cycles = 7× 4 Atp (New) & 5 Atp (Old)= 28 Atp (New) & 35 Atp (Old)

     And Atp From 8 Acetyl Coa Via Tca Cycle= 8× 10 Atp (New) &  12 Atp (Old)= 80 Atp (New) &  96 Atp (Old)

    ★★★finally Net Atp From 1 Palmitic Acid=
                
    28 Atp (New) &  35 Atp (Old) + 80 Atp (New) &  96 Atp (Old) - 2atp (For Initial Activation)= 106 Atp (New) &  129 Atp (Old) ★★★

Friday, 4 September 2015

Functional and Non Functional enzymes

Functional enzymes -enzy which have specific function in plasma.
Examples of functional enzyme-
🔺coagulation enzyme
🔺lipoprotein lipase

Non -functional enzymes-
🔺have nonsoecific function in serum.
🔺Comes out from tissue as a result of normal wear n tear.
🔺There level is very low in serum
🔺level rises during tissue injury
🔺hence help to diagonse the site of tissue injury
examples
🔺LDH
🔺Creatine kinase
🔺Alakline phosphatase

Wednesday, 24 June 2015

Lab values

#‎Reference‬ ranges
Reference ranges vary according to individual labs. All values are for adults unless otherwise stated
Full blood count
Haemoglobin Men: 13.5-18 g/dl Women: 11.5-16 g/dl
Mean cell volume 82-100 fl
Platelets 150-400 * 109/l
White blood cells 4-11 * 109/l|
Urea and electrolytes
Sodium 135-145 mmol/l
Potassium 3.5 - 5.0 mmol/l
Urea 2.0-7 mmol/l
Creatinine 55-120 umol/l
Bicarbonate 22-28 mmol/l
Chloride 95-105 mmol/l
Liver function tests
Bilirubin 3-17 umol/l
Alanine transferase (ALT) 3-40 iu/l
Aspartate transaminase (AST) 3-30 iu/l
Alkaline phosphatase (ALP) 30-100 umol/l
Gamma glutamyl transferase (yGT) 8-60 u/l
Albumin 35-50 g/l
Total protein 60-80 g/l
Other haematology
Erythrocyte sedimentation rate (ESR) Men: < (age / 2) mm/hr Women: < ((age + 10) / 2) mm/hr
Prothrombin time (PT) 10-14 secs
Activated partial thromboplastin time (APTT) 25-35 secs
Ferritin 20-230 ng/ml
Vitamin B12 200-900 ng/l
Folate 3.0 nmol/l
Reticulocytes 0.5-1.5%
D-Dimer < 400 ng/ml
Other biochemistry
Calcium 2.1-2.6 mmol/l
Phosphate 0.8-1.4 mmol/l
CRP < 10 mg/l
Thyroid stimulating hormone (TSH) 0.5-5.5 mu/l
Free thyroxine (T4) 9-18 pmol/l
Total thyroxine (T4) 70-140 nmol/l
Amylase 70-300 u/l
Uric acid 0.18-0.48 mmol/l
Arterial blood gases
pH 7.35 - 7.45
pCO2 4.5 - 6.0 kPa
pO2 10 - 14 kPa
Lipids
Desirable lipid values depend on other risk factors for cardiovascular disease, below is just a guide:
Total cholesterol < 5 mmol/l
Triglycerides < 2 mmol/l
HDL cholesterol > 1 mmol/l
LDL cholesterol < 3 mmol/l

Sunday, 24 May 2015

Porphyrias

#HYI PORPHYRIA
Most Common Type: Porphyria Cutanea Tarda with basic enzyme deficiency: uroporphyrinogen decarboxylase and Maximum Phototoxicity.

Psychiatric manifestation and Phototoxicity NOT seen: Acute Intermittent Porphyria

Erythropoietic protoporphyria: Ferrochelatase deficiency

Congenital Erythropoietic porphyria: (Only porphyria with A.R)Uroporphyrinogen III synthase

Pseudoporphyria: A [bleep] photosensitivity that clinically and histologically mimics PCT.chronic renal failure treated with hemodialysis,exposure to ultraviolet A (UV-A), Drugs.

Variegate porphyria: protoporphyrinogen oxidase def,cutaneous photosensitivity, systemic symptoms arising from neurologic dysfunction, or both.

Acute Intermittent Porphyria, Varigate Porphyria and Congenital erythropoietic porphyria produce increase in urine prophobilinogen.

Wednesday, 6 May 2015

Hemoglobin

1) Hemoglobin D-Punjab – (α2βD2) 

results from a GAA ->CAA mutation at codon 121 glutamic acid changed to glutamine
most common form is called Hb D-Punjab after the area in India and Pakistan where it is most frequent 
a/k/ as ---- Hb D-Los Angeles 
Hemoglobin D co-migrates with hemoglobin S at alkaline pH
Hb D does not sickle

2) Hemoglobin H (β4) – 
due to 3 alpha gene deletion. 
formed by a tetramer of β chains 
variants of α-thalassemia.
3) Hemoglobin Barts (γ4) –
Due to deletion of all 4 alpha genes
formed by a tetramer of γ chains
variants of α-thalassemia.

4) Hemoglobin S (α2βS2) – 
caused by a point mutation in the β-globin chain of haemoglobin, 
glutamic acid is replaced by valine at the sixth position of β-globin gene (on chromosome 11)
5) Hemoglobin M:-
group of abnormal Hb's in which a single amino acid substitution favors the formation of methemoglobin in spite of normal quantities of methemoglobin reductase.
Strictly speaking, Hb M are Hb's with mutations at the proximal or distal histidyl residues. Other Hb's M tend to favor the Fe(III) state. 
Heterozygotes have congenital methemoglobinemia; the homozygous state of these genes is unknown and is presumably lethal. 
Specific types include: 
Hb MIwate, α87His→Tyr (α chain, position 87, histidine replaced by tyrosine);
Hb M Hyde Park, β92His→Tyr; 
Hb MBoston, α58His→Tyr; 
Hb MSaskatoon, β63His→Tyr; 
Hb MMilwaukee-1, β67Val→Glu.
6) Hemoglobin C:-( Hb C or HbC) 
abnormal hemoglobin in which substitution of a glutamic acid residue with a lysine residue at the 6th position of the β-globin chain has occurred.
7) Hemoglobin (Hb) Q :-
single nucleotide polymorphism occurring in the Hb α-2 chain.
members of Hb Q family share molecular feature-----the replacement of ASPARTIC ACID (Asp) by HISTIDINE (His) at different positions in the amino acid chain.
These include 
1) Hb Q-Thailand (α74 Asp→His), 
2) Q-India (α64 Asp→His) and
3) Q-Iran (α75 Asp→His).

Thursday, 9 April 2015

Porphyria

mnemonic for porphyria👉

Mnemonic for the Hereditary porphyrias...

All---------------Acute Intermittent Porphyria

Congenital------Congenital erythropoetic Porphyria

Porphyrias------Porphyria Cutanea Tarda

Have------------Hereditary Coprophyria

Variable---------Variegate Porphyria 

Presentation----Protoporhyria

Now all u got to do is memorize the pathway......
the first enzyme.....ALA synthase and ALA dehydrase have no deficincies that i know of and even if they did then they wldn't cause porphyria.....
then you got the next enzyme 

Uroprophyrinogen I synthase..............Acute I.Porphyra
Uroporphyrinogen III co-synthase.......Congenital erythropoetic Porphyria
Uroporphyrinogen III decarboxylase....Porphyria Cutanea Tarda
Coprophyrinogen III oxidase...............Hereditary Coprophyria
Protoporhyrinogen oxidase.................Variegate Porphyria 
Ferrochelatase....................................Protoporhyria

Sunday, 5 April 2015

Body odours

Body Odour Questions
Condition- Odour
Oast-House Syndrome The urine has an odour similar to that of dried celery, yeast or malt, or an oasthouse
Hypermethioninemia May experience a fishy, sweety and fruity, rancid butter or boiled cabbage odor
Tyrosinaemia Cabbage or Rancid butter.
Cystinuria Because cystine is one of the sulfur-containing amino acids, the urine may have a characteristic "rotten egg" odor.
Diabetic Ketoacidosis The patient may have a fruity breath, a sweet taste on the skin, or emanate a distinctive, chemical smell.
Isovaleric Acidaemia A symptom of isovaleric acidemia is an odour of cheesy, acrid, sweaty feet.
Phenylketunuria The person may present with a musty, mousy, wolflike, barny, horsey or stale smell.
Trimethylaminuria The odour produced is similar to decaying fish.
Maple Syrup Urine Disease Patients smell like caramel, maple syrup or have a malty odor.

Saturday, 4 April 2015

NAD act as cofactor for

NAD act as cofactor for
1)Malate dehydrogenase
2)alcohol dehydrogenase
3)lactate dehydrogenase
4)glyceraldehyde -3-phosphate dehydrogenase
5)alpha ketoglutarate dehydrogenase
6)alpha glycero -p-dehydrogenase
7)pyruvate dehydrogenase complex

Sunday, 8 March 2015

Markers for intracellular organelles

Markers for intracellular organelles
➡Plasma membrane-Na+ K+ ATPase & 5' nucleotidase
➡Cytoplasm-LDH
➡Mitochondria-Glutamate dehydrogenase
➡Ribosome-RNA
➡Nucleus-DNA
➡Endoplasmic reticulum-Glucose 6 phosphatase
➡Lysosome-Acid phosphatase
➡Golgi apparatus-Galactosyl transferase

Sunday, 19 October 2014

Amino acid

AMINO ACIDS

both keto n glucogenic- mnemonic PhyITT (pronounce FIT):
- phenylalanine
- isoleucine
- tyrosine
- Tryptophan

Only ketogenic amino acids ( remember Ketones KiLL)
- leucine
- lysine

Semi essential Amino Acids (remember Semi means HAlf)
- histidine
- arginine

Amino acids which dont take part in protein synthesis
- hydroxyproline
- hydroxylysine

Thursday, 11 September 2014

Imp error of metabolisms and treatment

Imp error of metabolisms and treatment

Alkaptoneuria-vit c, nitisinone

Homocystinuria-pyridoxine + folic acid

Cysteinuria-alkalization of urine, d-penicillamine, captopril

Hurtnup dis-nicotinamide

Multiple carboxylase def -biotin

Methyl malonic acidemia-vit b12

hyperoxaluria-pyridoxine

tyrosinemia-NTBC, liver transplantation